BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A03SP1|AL428821
(280 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 542 e-154
>3x_Contig1619
Length = 7770
Score = 542 bits (272), Expect = e-154
Identities = 276/278 (99%)
Strand = Plus / Plus
Query: 1 tataatggagttaattagacttgaactcatattaaatgcatgcaaagcattcgttctacc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4438 tataatggagttaatgagacttgaactcatattaaatgcatgcaaagcattcgttctacc 4497
Query: 61 aaatttaactataacccctacatattatacaataattaagtctttaataggaattgaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4498 aaatttaactataacccctacatattatacaataattaagtctttaataggaattgaacc 4557
Query: 121 tatatcatctcattaacagtgagaagctttaaccattaagctataaaaactatatatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4558 tatatcatctcattaacagtgagaagctttaaccattaagctataaaaactatatatttg 4617
Query: 181 amgggaataggaatcgaacctatgaagaacacagtcattgagtttacagctcaactccaa 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4618 aagggaataggaatcgaacctatgaagaacacagtcattgagtttacagctcaactccaa 4677
Query: 241 ttaccaacattggagatccctcctatataaatatatat 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 4678 ttaccaacattggagatccctcctatataaatatatat 4715
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2060
Number of Sequences: 1807
Number of extensions: 2060
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 280
length of database: 10,358,551
effective HSP length: 16
effective length of query: 264
effective length of database: 10,329,639
effective search space: 2727024696
effective search space used: 2727024696
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.1 bits)